YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187037261, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILLLFFFSF LISHVYTLHV THISDCGTAR GCWKLPNGCK DASDCQTMMT WKHERRHLII  60
   61 EIESKLVKPD MWLGIGFSKD GLMGNDTVFE CQFPSTGSGS VLLSHNTAKR NIVLKTASEL 120
  121 LIRDGFTEFN DGKAMCGGEW ILDNIHLDDN ERKLMHVISS GRYNLFFAYG KMENGEKRMH 180
  181 GMVGKEAPWK SQDQVRFCQR CSSSFANVDS VGTNEFSKQ

Type	Start	End	Confidence
Signal Peptide	1	17	0.96
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	219	0.99