YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39597059, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPNISPTCQ EGIREACVTL RNACEPQILD DVAGRMTEYE SEFGRMLYTI SILIMFSFVI  60
   61 IMLMVRSIKR THSTVEMDAL LDAMRFREEL DIRDRQRRRL MKAKTKVSAW LNRDKNATSN 120
  121 GQMKSKNSEW KPPPKGTGTR PRGHYSISTV TSDIPEIVVS ADDSGNPGLL MRPHTPAISL 180
  181 IYDFGVASPD LEEEPDSRKP SIASSTALPM SSSSSSSLAS SIEHKLNSIK SNPRTFSLDT 240
  241 NASTSSRTHR VDIDDKSFSL DVHVDCAGLV SVVRWLLMRK FDVTVFLPVV YNNINNYNSK 300
  301 NAELLTVN

Type	Start	End	Confidence
Cytoplasmic	1	43	0.77
Transmembrane Helix	44	65	0.92
Non-Cytoplasmic	66	308	0.78