YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187037281, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFELAFIAVL VAAAIYIFAT LRKNGFFVII EPSVTTSPKH LDKPLTVYYK YHLGPYQNVC  60
   61 EIINEAKHIL SSSVNSATYF GIYYDNPENT DSHFLQSAIG VVFGNDGKDL HEEKYAKELT 120
  121 DNGFEKFVLP KVERAVQAVQ PSTGGFASFL ALVWFTYSTI KKYISDNKLE TTYAVEFYSH 180
  181 DEIDVIFPLD DASEFLVKDY QSIDKLESDA AKKRFDSSEE DSESDPEGAD EPEDEEKEN

Type	Start	End	Confidence
Signal Peptide	1	19	0.92
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	239	0.94