YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157751828
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRAFLKKQT FSEGAECIVQ KAMTDYEYLG NVDKSNEGES CVPWIESTES WFSTASNTEK  60
   61 QRKQPTENFH HSKCRNIKLP IDHPMHNVTA NGALKTDDIT SGRKGPWCFI EKPGNDGIST 120
  121 FSYSPSACFD PCDETRIVSD TEKKRVIENG YTVLKLNYNP TLLDPIEKLF DSYDFGNMKY 180
  181 YTFKKSREQA PQYLVLRRRV FTALCIIFVA VMIWILTCFC IKKHSQKIHR RKQKALEGFY 240
  241 ENTDLADIKM QSELRKERED A

Type	Start	End	Confidence
Non-Cytoplasmic	1	199	0.92
Transmembrane Helix	200	221	0.95
Cytoplasmic	222	261	0.91