YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157751884
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGIQEPVLP RWIVLWLFVS GMICTYDVAY TMNRPFTNDP ASPRANLLFG GWALYSSVDR  60
   61 HYLTTNDIFT CSTGRVMLLE CLLNFIAIGL AAARNRHGLL LAFTSNIMVL WKTILFFSVF 120
  121 LGQPDGHLPP MNPNKSVWSK FMIFWIPNGV WIIMPTVVLF ALWNKLALPP KISEKYWEAS 180
  181 NKCRGDLSFE DQKKVALD

Type	Start	End	Confidence
Cytoplasmic	1	11	0.75
Transmembrane Helix	12	30	0.95
Non-Cytoplasmic	31	70	0.80
Transmembrane Helix	71	92	0.81
Cytoplasmic	93	98	0.81
Transmembrane Helix	99	121	0.88
Non-Cytoplasmic	122	140	0.89
Transmembrane Helix	141	163	0.90
Cytoplasmic	164	198	0.93