YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187037404, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLKSLVVLS VLAVAAQSVP ASVKVLPFVD SSLPVKFRQV IAEAAPRVPA NLASYAFAVD  60
   61 LSVPASQSTL QCIKQAGYAA AFIRAYNPAG QGSFDTNACS TIQNAYYAGL GTEIYMTPQP 120
  121 ASSKQGYQQL DEVYQGLTQA GITIRSVWIQ VTSPTNWPAS ATNNVNFINS IISRARQYGM 180
  181 TVGIYTSYYD WNQITNGWTS IGNDVLLWYW NVLGGGVNGE TPANFADFRA FGCWTAPSVK 240
  241 QFAQVEQVCQ ITVNRDVYAA GSMLKAADAV QEDGKIYAGG FI

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	282	0.99