YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187033162, gi...
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPGTKSITI IFVFYLISSL FCSVSGYVLY SEVEAEDFLN LAAAAYADSS NITARQSCID  60
   61 ISFPTDEFHV LMVMSAPCDK RGNQCQAFIA ISDLTNQVII SFRGTNSGGQ LLSEFGDGLE 120
  121 DYIPYTEVDG SNNTVHVGHV NVYFLDAMNQ MWEDMVEPTT RNRQNYTYLI TGHSLGGAMA 180
  181 TLTAFRISFR QFSNKIKVHT FGEPRVGDIV FASYFTDMVP YSFRVVHHSD PIPHLPPLNV 240
  241 DNESAPGMPY HHPREIWYND DFSSYVLCSD VNGEDWSCSD KLRFWNYGSK GAYRHTHYFN 300
  301 HFVSEYGSMG CKFTSQIRNT FISLFMSIFV LF

Type	Start	End	Confidence
Cytoplasmic	1	7	0.68
Transmembrane Helix	8	30	0.71
Non-Cytoplasmic	31	332	0.78