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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157771782
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRCSAPREI SVSEETTEKS GRKSPKSPID IKKASKVSPL CCKNGSECQV AGNCVCKPPK  60
   61 PTGLKEDTPT SSRETYDVFL GGSCGTTVWR RQSVIPFLKK RGITYYDPQR SFWSENMIYE 120
  121 ESIAKESSSL FLFVIDPATV NATSFLEIAY FAARKSPKLV VVFLGKTEWA EKAHPDDLPD 180
  181 RNRTCQLLDK ILESHQVPML HTIPDALEFI EEEMLGRQSL FEAMKSKTNR LPYIQIRARR 240
  241 AIRNIKGLTS QTLKVCKTYA TKTFVTGLID TAVLIGISFA FPALPLFFIL IPLLMLNVVF 300
  301 FGVVHKVQSL RKRYPRMIAD SSAVMYHATP AIPSPRVTMK ATNVNGSISS KTVVRRRSKQ 360
  361 NFEQYFPDEG ASSFIVPSSF LPKQETKVNI DCSVVELCSS SPDDNSWVQE LAAPALDGKG 420
  421 TPYSYVLATP NFQLDNRMNC LRTWFHHHKK FFYYIPSTTT FLSGMVEIAY ILGHTNWEGT 480
  481 VCVPATSQIL EGPDDMVEDE KDHARAARRR RNDCYQIAFC YLKDMAKRRQ CRVFTDIGIA 540
  541 VKALVDPSIR GV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle