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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187033269, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLNLSSQLLQ WLDQRIPMGD PLRIPSIDSY KYLQDLGKGR FGTVCKFMNS STLLCETVKK  60
   61 VNMEIFDHWS QDATKVSNRL DTFIAEFRYL HKVTNDNNRI VNFLGVYADN KQMYIMSEYL 120
  121 PRGSVKDMIT RETIGEDTAI KYLMETVEAL DYLHTLNPPV VHRDIKAANL LITIGDSIKL 180
  181 ANFGLVRDLA IDGYGIAVAS EITLDFRATL LYVAPEVLSS KLGPGNRKAY ELPADIWALG 240
  241 CTFIEMLLKL PPHFEYFGNI NEIPQVLLGY AKRVDGKELP YTSEVLVPSS SKCIQKIVDY 300
  301 MFVKSPELRP TTKNLKHQIK KYLDDDESED ETEVMSSASN SSTDGTTDQS RNPIDRKVGR 360
  361 IGNCLPIENM EYAVTRRDQP KKKRKPPHSN TTHFMIASGY YLSRILYFLN ILGRSICYLL 420
  421 LFLTLGITAL GLFLLISFFV VRFVRYVIAI YCNCDLMQPQ YLIISGILIV LMFALLFSCC 480
  481 MVALGEYKFR MANQTLGGSK FFVPRPQKSA TLCGVTIITG KDDIPEAVLP LDEEVAISPS 540
  541 VMKNHDDYYY D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle