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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157772042
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYSTVKVIG LVFHFVVCVV STDFDNAHVM GVPQVTCSSK LITVTFNTNI PFQGRISVYN  60
   61 KLFIPACNHD YSTNIQKNAT FHMDIMKCAD TSFLKNGSRI LKAYVEIGFH PLVMTNSDRT 120
  121 FLVECLDNTI MPIVNVAQSF ADCTHLVRMA SEWSSMTEFH VGDAIVHEWS CKLPNSAKTQ 180
  181 TFLTNCNALS QNGQVIHLID ENGCVIDSEL MGDVVYNDHV PKLYARARIF KFLTDDKYRI 240
  241 ECTLEFCDNG SPCKERVFPP KCAFTKEEIT NRSIRNQLEQ STMSGVPSIA YDSKLKVSSA 300
  301 WLSIKLNQYT ETHGLHPRYH LKTFLDPTLH DVIPINAADH FLMGISYREP IPKLSSHHTD 360
  361 THPDNNRVEG ARILHSSAFQ PIISPPIDSH EEFIETITFG SSLNSEPILN VQKEMHLRQE 420
  421 AVQKVFPHKE KEPLKTEKFM KQNKNENNKN GVLEDTTQSP LVFTTTTPSA TMMVPTTTTM 480
  481 TSSTKSFNIH KVTELLNTKK KSFEKGNALV EMTQTTPATA TAVNLKFYST TSAKKLTPTT 540
  541 PYAPAESSTT PQPPNSTKSI RNVTHSVPTV KKYDKFVNNN ADWRFDDKAI NDSDIVSEKQ 600
  601 TSACFNATII SSQRQCKWSG VEHLLLIWSF ASLIVWMMLI ALFLYRYSSR KPQWIGFREK 660
  661 ELRRVTQSRV LSQDHPWLHA DAFEERNQNK NEIEINHFT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle