YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157772202
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFFMLVCYF LLQLCFQPLV SQFFDAETPW QFAGFAAINI PTTDNNNDIS SYYPSFPYLQ  60
   61 QQQLQLQQLQ NANQQQQQQQ QSFITTPHNS PLLPSAVLIP KRETANSLIS LKTDKEESEN 120
  121 QKERQQGELP NLSRGGSTLE HATYLSLIND KENFQASGCG WDLIRLQCHD LFGLCKGGCR 180
  181 DFAIAINSPI HDCRCIPFGY LALVKLAGK

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	209	0.99