YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157772262
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKMRNGEEN KTLMNGEAKA EPETFRQFLY NKQKGTVLGR TGTSWCQITV FYIIFYIFLS  60
   61 AFFIGCLAIF LKTLDPKVPR FYGKGTIIGV NPGVGYQPWL KENPDSTLIK FNLQDSKSWE 120
  121 PYVKQLDGYF SRYNNTNDTR ECGAEDSNEA LQTDPDSLPC RFDLGLFEKA NCGAKDQYGF 180
  181 KSGKPCVVVS LNRLIGWRPV DYDGNSVPEE IKSRYKSGSI TINCEGATPF DKEHLGKVKY 240
  241 IPEAGIDGRY YPYVFLPSYQ QPIAMVKFDT IPRNKLVIVE CRAYASNIEH DVSTRIGMVY 300
  301 FELFVEDKKP VAAPAA

Type	Start	End	Confidence
Cytoplasmic	1	47	0.67
Transmembrane Helix	48	71	0.91
Non-Cytoplasmic	72	316	0.72