YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187026765, gi...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFYTVLFII AVLLLLARLP IIGFYIRAVY YGLCLMIGGF VGGIASIPYG KSANNHFRMF  60
   61 KIFQFMTWPM GIEFELRNAE ILNDEKPYIV IANHQSALDV LGMSYAWPVN CIVMLKSSLR 120
  121 YFPGFNLCAY LCESVYINRF SKEKAHKTVD STLHEIVSKK RKVWIYPEGT RNANNELATF 180
  181 KKGAFILAKQ AKIPIVPCVF STHKFFYNQA EKKLTGGKCI IDILPEVDSS KFETVDELST 240
  241 HCRNIMQQHR YKLDAEAANL NL

Type	Start	End	Confidence
Cytoplasmic	1	4	0.48
Transmembrane Helix	5	24	0.82
Non-Cytoplasmic	25	28	0.48
Transmembrane Helix	29	50	0.85
Cytoplasmic	51	262	0.58