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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157767766
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RACSRNTCLN GGTCTVNDET RMFQCDCPQG FSGLLCQDNC GLHCLHGNCL KGTFGEETCQ  60
   61 CSEGWMGSLC DILVTDDDAT AQKCSPQCSD DERCTKGADG LYFCQNTTVK NTTTLLSSCA 120
  121 THTCQNNGTC LADNGDVKCS CLPGFSGDNC EIDEDECEEH FCQNGAECEN LIGSYKCNCL 180
  181 SGFSGRYCEV QDKKQCIQDF CMNNGECVLS SSSELSCKCP NGYEGERCEL KIKVNDPLIS 240
  241 CTCDNPAHVC SIVNGSTQCE CPSGFMGADC KELKARPCDI GPCLNGGHCV DDGQNLFTCF 300
  301 CLPHWTGVYC GEPVECLVNG KDCRNGGKCV FLLTSTSCEC PEGFTGNNCE ISNSYRSHPT 360
  361 CRDIRCQNGG ACKLDAEGEP YCDCPEGFDA PFCEPKSGCT INPCQNGGTC QDADGQYFCH 420
  421 CTSGFGGVHC ETLKEPSTPI PTLGTFPSFT TSGIDQSNLA EITCEDCVNS INCLETESGA 480
  481 VCVCQEEYFG QKCDQKHNKC AKVTCPAGQS CSQISERSNI TAQCGCEIGH SGLKCDMVTS 540
  541 ATFTAKSLYI HQSSKFSLGT SSFENVAYEL EFSFRTTVEN THLASSENIL GEKILSIQLL 600
  601 SGYLVFNVTG NFMTHLLPMK INDAHWYTVS VKGDNDKIEI QVLNENGFKL VRKELNGQLE 660
  661 VFLTRFGKIS GAHHFIGCMA DVRVDGELII FTDSKRAIEI RKGCTRSEQC SRAYCQNDGV 720
  721 CVDHWESSSC KCKSPFLKPN CAYFLPKTTF GHLDQSSIVH LSTSETENHL LRNQIELSFL 780
  781 MRSGKPDAVL FYIGEKHAAD VLTNYLVVKI ASGLISVRYR TGGRREVEFT SKNRVDDNEE 840
  841 HHVQILVDKN RRQIIIDDLT ECSEPIISRM SQEFYVDDIL IGASNAVATD SEFYKGYLQD 900
  901 IQLNQKSVVI HPTSLAIEKI GKLEKTQNVI EGAVSDPMCN SNVCKHGECS ETFNDYTCHC 960
  961 SDGSTGRHCD KIDYCREAKC MEGSKCENAE NGHFCVFPIT SSNGSKLTYS IEPKSILSVP1020
 1021 SVKFSIRSHS SNGHIFTLNI GKLTVSAMIF KRRLVLVSNS QNQKFDNVIA DGKWHNIILN1080
 1081 PYKVTIDGKS YISTTLLFPS ESKNEASLFI GEQGQNVIFA CLDDFQLGSY PKLSFTKAKI1140
 1141 PTSAENWILT EKTEVGTGCT SSEQCGLFST CLNGGICVDI WNKRKCTCPI GFTGENCEEN1200
 1201 VNDCKYVDCG KNGYCLDGID DAKCICNNGF SGEHCEHAND ECEGTECHNG GKCVKNGEKV1260
 1261 TCKCEKQWMG DYCNVTMTES CKDSPCQNFG QCMQKTDSSF ECNCMDGYSG QLCEQRNVNE1320
 1321 CNHYDCNRGH CVMTVSGPAC QCELGYTGRF CEKLLNHCSS NTCSSRGTCS PVWNNTVCAC1380
 1381 DNNWRGSHCQ YQTNACLDFP CGNDGVCRTN EGNTFTCECQ KFFMGTRCEI EGSCLKANCV1440
 1441 HGECIQLSPE RHSCSCNIGY EGDSCDVSVW GCVGGGGDHR IDYCKAEPCM NGASCENKLT1500
 1501 GYKCSCSVGF EGADCEINID ECALGYCKNG AKCRDKINDY ECVCDGTGYE GRNCTTDINE1560
 1561 CENPNNCING ECSNTLGGYK CTCKNGFIGP RCSMRNPCTA LIASNNISSV TCVHGKCVNP1620
 1621 VVHIDKNREV AKYECACDRG YTGPTCSQRI KESAMSNISY LFGPIIAVVI VFAILGCLLL1680
 1681 FFVIRGNNAM HGHYSPSSHE FTQNRMAMPT VIKLPPQERL I

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