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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DHKA_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELKTFKDLN DDIIGDTSPV INTGDQPNPL RTQQQQLQQQ QQQQQQQQQQ QQQQQQQQQQ  60
   61 QQQQQQHHIP QQLYQKQQQQ QHSHSYGNHS FIHNVSPTSP SYDINNNNNN NNNNNNNNNN 120
  121 NNNNNNNSNN NNNNNNNNKN NYNNNYYYSP IENSNISKSL EESVLNQFPH NFNLNSSNNN 180
  181 YLNNSSSLHN INQSVNSLSN NNNNQTNQQP INNNNNNNNN NNNNNSNNSN NSNNNNNGNN 240
  241 NNNITDSPTK SKRHSTYETN IGSHQRRKSI QSLIANSAIH SFSKLKNKPL SSSTPSTVNT 300
  301 CGAVNNNSNN NNNNNNNSTG SLGAIPMDRS FDGNINTITE ESTGGNNSPR SNCGSNCGSN 360
  361 GGIPLSPRNL SSLNSGVNVS PRNIHLNNLN NNSSNLPPLS PRHINFHINV SNLNNNNNNN 420
  421 INPNNNPNNS NNSNNNVSPR NNNHNISPRG SNISPRSNNG GSTTISPRNI SNNNNIINNI 480
  481 NNNNILTPPR NSPRLENVNP TNSPRLLATS LNSTLPIVSS LTSSNNNNQS NNNTNPSINN 540
  541 NNGRNGHCIQ TISEEILGNK PVVYNNGNNN NNNNTNNSTT SNNNITTNNN NNNNNNINNN 600
  601 VLSTPRKRTK GNHSKTNSLQ DFETSSMNGG DDSISGAGSG GSLRRRNKDD NDENDGNSNN 660
  661 TNSNNSNNNN NNNNNSSNNN NNNSNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 720
  721 NNNNNNNYHN GATMMMSHNH QSIGMSSSPK KNNFKPFSRN CSLMGMGRRA WAIILGLFIV 780
  781 GSSISILATL VLRYSEENSI ADDFARVARD RFTMLRIEFN NRLYITQTLS LLLSVFPSTS 840
  841 EDQFVPFSKL WSDNAEGLEG IMWAPRVSNL DRYTWEIEHS VKIREIVTNP NNSSDMRDVP 900
  901 AAAASDYYPI LFSEPQSSND HFKGYNIYSD MWRRPSLNKT RDTGEKVSVA SPYINKLANV 960
  961 PKNSRSNVLL YIYQAVYTYG KVLSTVEDRR HEVIGFASCR FFISRMVSAS LQRLTEEDSL1020
 1021 DLYVFDLDST PIGELIYYRA SNAGNDDGSS PTNIMNGKML EDRSDMIYYN TMNVGGRNWM1080
 1081 IALRPSRKFT NKHYTFYPYA IGGVCMLLSA LVSFWFAVNT KHNIKLSATN EDLHKEIYNR1140
 1141 KLAEKALAES QERLELAMEG SEDAVWDWKV NTGELHISSR WFQILKAHDT SYQSRTLYEE1200
 1201 LKSSSTNNLN FKGDSKNGGS NNGTFNLFKN GKVDSSSPQS ITNVNTTNGG GGGELRKSNS1260
 1261 GYLYNDELFS PIILEEMVSS PNTHQLAIWN MKFLAELIHP DDKQKFISEI KKTITRETSI1320
 1321 MEIECRMRKK YGGYLYIIMR GKVVSNETSF KDNSLRMAGT LRDMTSRKDM QRLILEKEAA1380
 1381 EEANKAKSAF VATVSHEVRT PLSGVIGVSD LLLETNLSEE QRDYVQTIQK SSQALLTIIN1440
 1441 DILDYSKLES RQLKMETLPF SIIETCQAVI HMLSVAANDD VDILLRVPPN VPRIIFGDAM1500
 1501 RMRQVLLNLL SNAIKFTSRG HVLTDISVDD SIPPTNTEEE IIHLCITIED TGIGIPQSLF1560
 1561 DSIFEPFSQA DNSTTRKYGG TGLGLSITKR LIEEVMGGTI QVSSIVGQGS KFKCIIPFLL1620
 1621 PNTSPSDLNL ISPSSLPKPF INRSPKSTYS FTDKKNSVPS TPIPSGDILI NKVCLLICRD1680
 1681 TVTELVFKEQ LEWLGMIVKQ VPRNVIDSIK NTILNNNNNN NNNNNNNNNN SNNSSSIISP1740
 1741 SSLDYSDENE HLDLVLIDLE ILTEHLKIPS NVPIIFITPT KFNISKHNGI LNKWITKSPN1800
 1801 QRVELIRRPA ITDKLIPIIS KCIKSQVQFT SGSSQLQSQQ ANLQQQLLHQ QLCNNGQTLN1860
 1861 NNYNSGGIGG GGGGGGSNTM NGSSGNLSNN NNFGQTPLSS GLVLLVHTGR TPPLFNNNGN1920
 1921 SIIPPLELAV DHHGNQQQQL YQQQQQQQNN SSGNFQQFYQ QQNNNSNNSF TPTLPNENSN1980
 1981 NSIMNNSLNN NNTTPSNVTP TLFTSSPLDL QGRDTPVLQP PAYRKKALIV EDNELNRKVL2040
 2041 AQLFKKIDWT ISFAENGREA LKEITGERCF DIVFMDCQMP VLDGFQTTKI IRSKERENNW2100
 2101 KRMNIVALSA GSSSSFVQDC LDSGMDSFMG KPITLATLKD ALAKWGGYNN 

YRC Informatics Platform - Version 3.0
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