YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39595997, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRHTILLL FLVMGLASAD FSASFKSFII NNYSQQMYDD LARNDLGAVG SYGGGTHDGY  60
   61 SPTSRRAVIL VHGTTNNAGN FFGQRNALLS NGWSEDTVYG TTYGSGSAAI TPAQDVSMDC 120
  121 AFVQQMRNFI KVVADFTKQK VDIIGYSLGS PIVRKAILGG NCVDGNVELG APLTSSVETY 180
  181 ISVAGANKAS YLCVLPVTNA CSSVNGLFCL SSFLQNINSV ERYEGSHIYS IYGINDDKVG 240
  241 YRNVPCLTKN SQIHNSDQEF SNATGNHDMI LSGTIDLQMN LLNAH

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	285	0.99