YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157747675
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKLVCLSGI VCVTMLFFIA VSNVSSPNEV PLWSANVMDP QRNEKTFRIL LVGDTGGIPI  60
   61 LETTWAQRGV KETMALIANE KDVQMVLNMG DNIYFTGPTD EFDPRFETRF EAVYDSPSLQ 120
  121 VKWLTIAGNH DHFGNVTAEI EYTKHSRKWY FPSLYYKQSE EFNGTRIDFI MIDTISLCGN 180
  181 TKDIQNAGFI EMLRNESHDP RGPANVSAAE EQWTWLETML SQSSAQYLIV SGHYPMHSMS 240
  241 SHGPTECLRI RLDPLLKRYN VNAYFSGHDH SLQHFEYDGN EGHKIHYLVS GAASRADAST 300
  301 KHVKEFSKDN LKFNYPEKSW FSWSPVSQLG FRKGGFIYAE FGHESARLDF YDKNGKQLYA 360
  361 TFIPTRRILT EFVTKSTVSP FVEI

Type	Start	End	Confidence
Signal Peptide	1	26	0.90
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	384	0.99