YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39595670, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNAELIQLL LTNQAAANAN LNLLNPVNPL LGVNPLIGSF PFTTTTPATF QCLPPLPNIG  60
   61 PIPPIPSTPL IPTPLPILTY PPQAIKEEEP TIKTEQPDPT PLEPEIPFEM GSIPISTYYP 120
  121 THFMCGTQLR MVNGEIKKVE NLSSDDFLKC AGEPDGDIVN ASTVKSIRFN AGSVSIVFET 180
  181 GSERLKTGDV CIVLTKEEDE TTECAVDIVT AERDLELFNQ RAALREKLVD VYYEHVSGRV 240
  241 SAPPEGIWAH ASVSSRLRRI SEC

Type	Start	End	Confidence
Signal Peptide	1	17	0.68
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	263	0.99