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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157747461
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.59
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISVGRIGW HILAVLVSVV ISIEHDSICD ESTGACVEPT HTVIRLAKRD DELARRIAAD  60
   61 HDMHVKGEPF LDTHYFLYHS ETTRTRRHKR AIVERLDTHP AVEWVEEQRP KKRVKRDYIL 120
  121 LDNDVHHANP FRRSVLSRDG TRRSQRQQPQ SPREIPSLPF SDPLYKDQWY LHGGAVGGYD 180
  181 MNVRQAWLQG YAGRNVSVSI LDDGIQRDHP DLAANYDPRA STDINDHDDD PTPQNNGDNK 240
  241 HGTRCAGEVA ALAGNNQCGV GVAFKAKIGG VRMLDGAVSD SVEAASLSLN QDHIDIYSAS 300
  301 WGPEDDGKTF DGPGPLAREA FYRGIKNGRG GKGNIFVWAS GNGGSRQDSC SADGYTTSVY 360
  361 TLSISSATYD NHRPWYLEEC PSSIATTYSS ADFRQPAIVT VDVPGGCTDK HTGTSASAPL 420
  421 AAGIIALALE ANPELTWRDM QHLVLRTANW KPLENNPGWS RNGVGRMVSN KFGYGLMDGG 480
  481 ALVNMAKSWK TVPEQHICTY EYRLANPNPR PIVGRFQLNF TLDVNGCETG TPVIYLEHVQ 540
  541 VHATVRYLKR GDLKLTLFSP SGTRSVLLPP RPQDFNANGF HKWPFLSVQQ WGEDPRGTWL 600
  601 LMVESVTTNP AAAGTFHDWT LLLYGTADPA QPGDPVYSAT PPTSQGVLSR VQQLTSQADQ 660
  661 IVERNRNDWE ITKEESSHWN WEHKIQQKKS SATSSSKLNS LFVCGLVIFQ PILSVILVCI 720
  721 FAAIHRQFAI 

YRC Informatics Platform - Version 3.0
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