YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157746103
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKHSLLQV SPHRELVFTG PFSDVVTAHM TLKNITANPV CFKVKTTAPK QYCVRPNSGL  60
   61 LKNGESKQIT VMLQPLEGIP TDAGRHKFMV QSCVAPAEDL QDLESIWKIV DPAELTYSKL 120
  121 MVTFVDKKNP ASGDDNKTFT VNGNEETFAS AGQAQELGSS FSAPSSQQDG TVASLRKSLK 180
  181 STIDEKEELQ KKVHGLEQEI EVMLKKNRKL QQNQSDGALV EGAFPTLQVV LIAVAALLIG 240
  241 LIFGHLF

Type	Start	End	Confidence
Cytoplasmic	1	221	0.59
Transmembrane Helix	222	246	0.83
Non-Cytoplasmic	247	247	0.62