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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187036023, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLFISLLLI IPKHVKSDLW AETERMPDLQ QWRALCGYYA VATAYMKDSN ARITVFAPVD  60
   61 DVFTYNPDIR ALDQKETLSH IVDSQVVDLT MNKVWEKQTL IRSTINSGYT YITQFENNPG 120
  121 NFSYFANAGM LCNHASNQWG IISGEQYLFK ICTPIGHRPY PGTALSFIRE HDVTVFEERQ 180
  181 YNNRDLSQIR DILDRTPDIA LVIYGSSAWN GFHTFFIPND AAFARVVDRN RIDREVLLAH 240
  241 VTSTNRVLFT WPWLYDGGQH YYPSVRFSAN IIEDNFKLKL VMRNITDRRT GKWDLYAVSE 300
  301 VYERYSQFRR GAVWAKILVP NIPTQNGVVH IIDNVLGIVS ETIDMMIYRN EKTTTLMRYI 360
  361 NTIGQIVRNY FSATGGLVTF FAPWNEAFDR IPEQIERRLL RDRIWLEQIL KLHIVPAKEL 420
  421 TSDEITNETI VNTIDNMRQL YFIKGEWPAN NVTYYVIGGG IKTAIMMDNV AATNGIVHYI 480
  481 ERVLGVPYQT LWEIMRNESR LQSSFHMMQN LQLRYSMDPW QVLTPEQNFT FFVPTNEAWH 540
  541 KQPATLVNRM NDGGHWQALQ YVYKRHIVQG HALMYTDLRE RTYVMMNDEK VVLRRRGRFW 600
  601 ELYWPRGNRR AQVIEGGEIA GINGYMHMID DVLIYEPDLR AHACTTEPVF FQFLIVCLVM 660
  661 VWRPGWFSQL YTAFLYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle