YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39595151, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKADENATLM NGVEPAAPAR DDVPETFRQF LYNKKNGTVL GRNGKSWFQI IVFYIIFYAL  60
   61 LAAFWLACLT IFLRTLDPKV PRFYGKGTII GVNPGVGYQP WLKERPDSTL IQYNLRDQSS 120
  121 YKAYVDQVKG YLTKYDSNAT ETRECGAGDS NDDLEKDPEA LPCRFDLSVF DKGCSEKTDF 180
  181 GFKSGKPCVI ISLNRLIGWR PTDYPTSSVP EEVKDRYKAG SIAVNCRGAT NVDQEHIGKV 240
  241 TYMPPSGIDG RYYPYVFTKG YQQPIAMVKF ETIPRNKLVI VECRAYALNI EHDISSRLGM 300
  301 VYFEVMVEDK PVVEKKEL

Type	Start	End	Confidence
Cytoplasmic	1	49	0.75
Transmembrane Helix	50	73	0.91
Non-Cytoplasmic	74	318	0.81