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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187036419, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLHRNRFT ILFLVFAILN DVRIDTQMLS PPITDRFKCL TNGCCDHHEW CRFWASIGEC  60
   61 NANKDWMSEN CQLACGTCSA PPAPLLPVTT TASSFQQSNG GFVQTTTVSS GPTTTVTIPP 120
  121 SSLTPVNSCE RVKDSIAQAS ELMSISRLIN PVEDNFGRNM LSIDDITRSV PTGCVPQLSD 180
  181 VGVDCRKSLC YHLMYRTLDG TCNNLEKPMQ GAAFRRFNRH FPAQYDDGRG EPISSLNKSR 240
  241 PSAREANRVM LSSAQSVVHD KFNNMMMQWG QFMSHDMSKT TLQPSANCKT CDPVPSKCMP 300
  301 IPIGEKDPNL GFKSKQCLKV SRSAPICRVE PREQLNENTA YIDGSMIYGS SLKDLHKFRD 360
  361 GRTGFLRVTR FNNQNVLPFD QSKCANKDKC TASFTAGDIR ANLFIGLSSL HIMFAREHNR 420
  421 IAQKLTELNP TWSGDRVFQE ARKIVGAQIQ NVLYKEYLPK LLGVSFDKVI GPYKGYDTNV 480
  481 DATIANEFTT SAFRFGHGMI EEFYKRVDLS GNNITHGGFF FGDGVFKSGK ILFEGGVDPI 540
  541 IRGFMTTAVK RPHRMTPAIT EKMFGSTDLG SLNIQRGRDH GIPSYNKMRQ FCGLKFANTF 600
  601 EDFGDMILDR NLRAGLARNY NTTNDVDFYV GSMLEDPVIG GLVGTTLSCA IGEQFKRARD 660
  661 GDRFYFENPG IFTRSQVEEI KKSSLSRIIC DNADNFELVS QDAFLLPGAN LTPCNKIPEM 720
  721 DLSKWRAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle