YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187036417, gi...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNILKIHTFL IWLHKKKIES DSIAHKTELE KFNSKIKLKD SEIYGYRTKN EQCKRELQSC  60
   61 HNTDDGAKEP PKADASEVSG LKQKIEEMQK KLEEQENNSN SMAAILKGGA IEHYTQNETA 120
  121 HFQRVQKANE PLFFDRGNIQ HHVPDKLMMG RQLAQTLEEV KAKKMADKEQ LDKHPMDREN 180
  181 QGEKNEKIVA PITFSFSVFF LIFPIKFGFL QYPYFEFSYS NFFSEQRYVL ISEVLWKREC 240
  241 VCFGGDSNTL KGKKRKGTTG YHSKNGWEMT GSEMSDCEMV VCILKKSNLG IYYIQEFWIF 300
  301 KILIICGLLN SNLRISEFPN FKTSQFQNFK ISEFLNFKTQ VFFKKKNVFW G

Type	Start	End	Confidence
Cytoplasmic	1	187	0.77
Transmembrane Helix	188	210	0.72
Non-Cytoplasmic	211	351	0.78