YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157768582
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIPFIVLGL LLVTTVFAND STRVFIGELF EHNLGDNFTV ASGKNNRPLP SWLMIRDQIL  60
   61 TGIPTENDVG KHTVMITSRR RKPTYLYLNV EEEVISPCGT INNTFWMETY HEQEATLANR 120
  121 IETALAMNEL ELDPNVKTVR VYSYNFSLIN RNLEEIGQEA VNGNYMAIWR VACEDFDEAV 180
  181 NYMDEFVDRE DVDYDSLKLA KGFFKKGVAP TPTPEPVEED ETTTEYLRTT TELIRTTRRV 240
  241 FNDNKPILLN RLPSFVCTRG EICELRVPAE TFKDAEDGDT FKMKLTVLAL DNAEVWMINE 300
  301 ANKGLIGIPM RTGEFNYRLE ARDKAGQLAS APFQINVKPA LPTNHRVELE MDMPTPQQMA 360
  361 TNPAKRNLLM RALARSLKAP INTFTIQEIG SKNNKTMVAF SNNSIPYKVC DKVALDAMAS 420
  421 KMIMKQKMRT KTEFVKTMGN QFYVRRATMI RHGNCDETVE ISTTAPTIQS MQEADSQLLL 480
  481 ICILLFLLLA IAVAIIIYCA CIKKSGKKKS PSTEYVSKGL PVVFPDEVEE NDPTNAGTPM 540
  541 LAREERPPLK VSQHENPLYK PPPPIASNSP RLGHASSSSN QRLQSPFIPP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle