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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39594901, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSVSFGGSD SRFQSLDRAP GYSDGASGFA DIEDEENDII DLDEESYEYL TNTYFRAGHD  60
   61 GCDEYTSLTT FHGMIRVFNS RNCPSLIFWC LVVTTCLVFY IMVCGAMIKS YSTQPSFLRI 120
  121 NETKNVQFDT MIELCSEEKM KCYEIAREKE QMKCKEIDAH CVSIRFSTKT KIRLKKKGVW 180
  181 SSSIDFPITL NILSQHSLLF NIFKGLYFKH GTEEDVHHLV SKPHTHHMIQ LKVFQVETFS 240
  241 CLILEIFQIQ RLNLDRAQCV SNWHEIPWIP EDSKPDYHYS LKLCERLRYE LTGKVEYLQY 300
  301 DFPCQPACLE SQYKVSNSKL FHNSESVAIT FSVFPVVTYM EETRQKTLVD ILCKQSNYCP 360
  361 TSFLILCTGF LGGASSLFMG CSCVTLMEMF VFLFKLVTNS VCSDEPPEPD DSFYEEKFRF 420
  421 EFSDHRNKRR YAICDRETME KYLLSNNSME VKSINLDKRF SVFSHSAIKK APKLKTLKDN 480
  481 KNFEHIDIYD EGNREDLKEE SSASPKDEYS VDYHDECKNG FSKEIFSSSE TF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle