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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187025889, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLPYACVTA LVFLSIIFSG ISLFTYGWAT IRPFNPLYPL IDDDEILLGL VPFDPDTPFG  60
   61 WLVATCIFMY LNFACSILTF LFCVIGAIIF ILRGDSRYQK YIYVILCGST FLTGLFGAVA 120
  121 FVIFVASYHE ELENYFYGDV SFIQRRAQLH YHISFESIIS KSNFAISTHY HGTHSCRVHD 180
  181 NNHYYLVYET PIQYDPFNMR TEDYLSSIDS ADPLGSTKPP NLRGDFPDIR EDSTAGEDLS 240
  241 IQPPIDSILQ YPNKFAWPDP DEEISKKIMK AEEEAIQSMN ELMESVTEIS IMNSMVNATD 300
  301 GLNITEIELP NPSPIPRNFA NLREKDRLPE NTHCDKEQKD GNKCCDGRLA STMRDAMRHM 360
  361 ATSPDFGKGK EGIIASELQQ KVQQRFKKSY EVIVSRSDFV VSSYNGGDTF CKFENKGFYI 420
  421 LAYSTPKQYD IDEKEDEMEL AATSNKEPLG SNETMFENEA PWHIPLQLER SGERAGYPVG 480
  481 SHCTEARTGS KCCSLILFNA MKTGYDNHVA TSNFDAYDIR NISKAVQWNV EEVLQHSAEV 540
  541 IVSLDDFAYA TYNNNSYICK YRVDKYYMLA YTTPNHDLDD YDEMALTKIE TEPEAQLVFP 600
  601 SVDRSTNQVP FQNTPAPYWT TPRPIPTQVF QPIQYTQQPM YHQQQQQPVY NQQQQFFNQQ 660
  661 PMYHLQPSFN QAPLPYHYPG QASQFNPFLA NSFHRSKRQI GASPYPIHQN VYNDIGSAKP 720
  721 FNCPAGLSGL SGMACCDGGL QFEANKVIDQ AKQAPDFDKH NTRNLAKLMT RAVQKRFGTT 780
  781 FESIVAEADF SWGTNKFNGR TCKIDNDGYT ALTYQSSSKP PPPSDFLDIP GDPTLGGPTG 840
  841 SSGGGGGGGA GGNGGGGGGG SGGSGGAASA DASSGGGGNG GGGNGGGGNG GGGNGGAAGN 900
  901 GNGAAGGNGN GAAAGNGNGG GAGNGNGAGA GNGNGAGAGD ASAAAAAAHA QAAAAAQAQA 960
  961 AASAAAQQAA AAAAANAAQQ AAAAAAAANS NDAFSALAAA AGGACFSLDT WVTTPSGKKR1020
 1021 MDQIDIGDYV LTAGLDETYF TPITLWIHRE PERVQEFLTI MTEYGKTLRM TARHFMYRNK1080
 1081 CGNSYQKYIK ILPHDAEAIF AEDLRVGDCV VVMYRGKFHQ QKIESIIKNV RTGIYSPLTN1140
 1141 NGRIIVNDML SSCYSEVQQN TLQTTFFWAY DKLRNKLTEF FGDLYNKKIE LPTGTTLSKE1200
 1201 IMSLVLPIRK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle