YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39594751, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EMSRFGVFII GVMFLMSIFD VMRTVSADER VDVGTQYDKD DFEAEFGDEN TENLYSKGTE  60
   61 EDHIEVREQS SFVKPTAVHH AKDLPTLRVF YCVSCGYKQA FDQFTTFAKE KYPNMPVEGA 120
  121 NYAPVLWKAY VAQAVSVIKL GLLVIILTGI NPLERLGFGY PGPLRHAHEN KMSSCMLVFM 180
  181 LGNLAEQSLI STGAFEVYLG NEQIWSKIES GRVPSPQEFM QLIDAQLAVL GKAPVNTESF 240
  241 GEFQKTV

Type	Start	End	Confidence
Cytoplasmic	1	4	0.56
Transmembrane Helix	5	25	0.64
Non-Cytoplasmic	26	247	0.63