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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157764498
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLAAVLSML RYVAGSDDRD FVDRLHSYFT CNLLIGLAVL VSFKQFGGKP VECLVPDIFS  60
   61 SSWEQYAENY CWASDTYYVP TNEPVAGLHT DEKRQRKISY YQWVPFFLLL EAACFRLPSL 120
  121 LWKYLAGHSG IKINEIVKLS SDPNNIKPDI KRANIKSLTV HLQGALRFHR RLQKKQIRPH 180
  181 RFLWLFNLPY SAFFVTAMYL CTKFFYLANV CLQLLFMNRF LETDKYKWYG FGALVDLLNG 240
  241 TTWEQSGMFP RVSLCDFDVR VMGNMQEHTI QCVLVINIFN EKIFILLWFW YLALLVFTFG 300
  301 SFAYWLIVSL WGHLNRRFII RHLEMSDIAF DSSEEGVYDK VKRFIDNYLK SDGVFVIRMM 360
  361 TLQSGVIFGT DLVQELWRNF HGTEPQLKRS NSAPKIEERE TWWPAPPTLV NPINPWRYTD 420
  421 QNQANALRWR RALGANVDNT IATQDLMEKL LPENAHMRPP DDELLRRYPI AVKASYIDDD 480
  481 SNSTKSNQKN QNQNQDDQRQ SNQYSNQPQF QNSNSNSNQY STFYRSSSLS RGPDSRPVST 540
  541 ATDNGDQSKK PPMSTFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle