YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187024437, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIVVGSGA LAETVVGLLC AAGRRVSLVA PSGKVNAQKF DSTVIKAILQ EDSEKKIPFE  60
   61 FIDDLRQQQK LAEKNFKKIN VTTDLSKIEA ADQIIDACSA DEMSLFTHAT KAVPNATIIS 120
  121 LNGDKSPIHS DHVSVKLYSP IRETKTAKMF TNAKVSKKTL EEVNQLLDSM GFTVLSEEDS 180
  181 QVADRLVQDM QQVEKSRPLS RLASILVNPL NTPVTPQVPK EQYLLF

Type	Start	End	Confidence
Signal Peptide	1	21	0.81
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	226	0.98