YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187026266, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLSSWFEFT FYDAIFLVFV LGFFLYWLTR SEQPLPLPPK EVAPLTMTDM TCEELRKYDG  60
   61 VKNEHILFGL NGTIYDVTRG KNFYGPGKSY GSLAGHDATR ALGTMDQNAV SEQWDDHTGL 120
  121 SADEQETANE WETQFKFKYL TVGRLIKDGS EKADYGGRKS FVRGAESLDS IINAGAEDSK 180
  181 KDN

Type	Start	End	Confidence
Cytoplasmic	1	8	0.76
Transmembrane Helix	9	29	0.94
Non-Cytoplasmic	30	183	0.79