YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157770732
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKTDESSSSS AQQSSEQQQA AQPLAPQQTT PTAKATNPFI TPMTESTPGM SESWVELAPS  60
   61 RTSLCSSVDI NMVIIDEKDK DSRLSPVSIA QSPHVEFESL EQVKYKLVRE MLPPGKNTDW 120
  121 MWDWSSRPEN TPPKTIRMVQ YGSNLTTPPN SPEPEMSQYM PYESDSLFNV RVVFGFLVTN 180
  181 IFSFVVGAAV GFAVCRKIIK HHR

Type	Start	End	Confidence
Non-Cytoplasmic	1	172	0.94
Transmembrane Helix	173	195	0.92
Cytoplasmic	196	203	0.87