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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187026179, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRTTLNNLSS IWYAILTTLL QVYLLYLGFE RYRLYNEIKW PTGGYPYGYL MTYVSIYIVS  60
   61 IGGTFLLFTS AFFKSGNIAG DNERLADRES RVLEVDRSRN GDKSGCVHGM KVLWQHLPPL 120
  121 PQQIHVIIAI GQLIAQQLMF SQLFRHGFVN SGDFLNTELD FLYQRSRQLA TNLPIGETRL 180
  181 QGFRITADEL AGLPVSPNLL PVLMHLKLFG IPLEFFNLLL ALIAFAIAYP SVFWRVSKPF 240
  241 SLLFSLHLVI YAAQIIWGYI SFSVLFRIQE TNVYSVRPVG LGQYLSPIKP MGLNIYHPYV 300
  301 ILGSFIVRLV MTTLAPMAMY SYGYNKYHAN VLNVQHRNAA RTSQGQAEYG DYRRRSMNRY 360
  361 EGSKLCCDGY LPHMDAIALL VIVAAAIGPT IYALLILYQH EQKALILTCI IVDVIYMFSW 420
  421 ILMWLAMTLK RDWNFNVTHK VHQFYGLNKG MTIGPIRGNE NPSQMKTSIL VMHRDTMYVT 480
  481 DDQTAKESLL RACHTGKFET VSPPEDVYWK QGQQSPATRA KILTEVDGVK NSPEMSRLLR 540
  541 MGTDDTQQTM SYHSNGGRNI TQAQMSNSQI LQRGNSSPPG PSQFGTIQRS QQQYGQMGTL 600
  601 QRGQSGGTLQ RGAMVHDNVW NQYSAIQKKE EQQQQHMLGQ RRDSGEAAYG RVDSTYGSYA 660
  661 RIPNVSRIQV TPQGSQIRVN GYGGLQQNTL SRRDVTPPVH SQQPSLSSIR QSPMLSDRSG 720
  721 VNVPPPQPLV SREQSPYQRS AIKLSSFSEN KGSGIYGTSG IGSGNNVQWG GTQRVAPGQP 780
  781 GQLLWNTPGS VNGNKSSLTS TTTSSQNDEQ CFTPTSTLTS HGSNYTPTPG SPQGSNPIYS 840
  841 RINGASSTSS NLYGVASKES QYADRTLSKA PIKSTTVTTG NTILRAVNGT DDTVSSFSRP 900
  901 PTGALNQNDF ATSIVMKTLF CLFALVAVAS SFVAFAAPKQ EGTLNCLMCE VGVRAAENPA 960
  961 DREAHVVEDK FDAECKKELG AIPFAAKECE KYGNSKLDPI IHELESGTAP EDVCTKLKEC1020
 1021 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle