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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39594096, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFDRRIFAL VVVVCLSAIH AEETDEELNY EMDEGVVVLT DKNFDAFLKK NPSTLVKFYA  60
   61 PWCGHCKHLA PEYEKATSRV SIPLAKVDAT VETELGKRFE IQGYPTLKFW KDGKGPTDYD 120
  121 GGRDEAGIVE WVESRVDPNY KPPPEEVVTL TTENFDDFIS NNELVLVEFY APWCGHCKKL 180
  181 APEYEKAAQK LKAQGSKVRL GKVDATIEKD LGTKYGVSGY PTMKVIRNGR RFDYNGPREA 240
  241 AGIVKYMTEQ SKPAATKLAK LKDIERFMSK DDVTIIGFFA TEDSSAFEAF SDSAEMLREE 300
  301 FKTMGHTSDP AAFKKWDAKP NDIIIFYPSL FHSKFEPKSR TYNKASATSE DLLAFFREHS 360
  361 APLVGKMTKK NAATRYTKKP LVVVYYNADF SVQYREGSEY WRQKVLNIAQ KYQKDKYRFA 420
  421 VADEEEFTTE LSELGLGDSG LEHNVVVFGY DGKKYPMNPD DFDGELDENL EAFMKQISSG 480
  481 KAKAHVKSAP APKDDKGPVK TVVGSNFDKI VNDESKDVLI EFYAPWCGHC KSFEPKYKEL 540
  541 AQALKKSQPN VVLAKMDATI NDAPSQFAVE GFPTIYFAPS GKKTEPIKYS GNRDLEDLKK 600
  601 FMTKHGVKSF QKKDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle