YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39594067, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLLVVFIF TVIFSIGDGK FQCKNMRGKS VDWFVVYKLP KLSSGTTGKE FVYIDSESSV  60
   61 WTRENDINDA NVAVGATISQ AYSSDKTNNF AFMYSDDDPI KEADSYRGHA KGVSLFDSTT 120
  121 GFWLIHSVPN FPPLTSYSYP KTAEKYGQSF FCASMEVQHL TELAEHWKYI QATPYLINLP 180
  181 DKFATRFPTL RNVQAKQSLP RSATQFWISK PIKTVQGVTL MAYAKHKKFD GDIWNDLISK 240
  241 QNKVTLAVES WLNGSGDDLH TTCTDSSQTH DVTEMRVTGL NFASSKDHSK WAVSNSQTNP 300
  301 IVCFGDMNRQ KSQLKRGGGA LCIQNRNLWQ IYHSSVIQVE PCKSSFHFSF FRTSLVFLVA 360
  361 KFMISFF

Type	Start	End	Confidence
Signal Peptide	1	19	0.91
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	367	0.98