YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3328240, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKIELSRHI PLVTLIVLVL CITPPIFATK NCDFPAIFSF GASNVDTGGL AAAFRAPPSP  60
   61 YGETYFHRST GRFSDGRIIL DFIARSFRLP YLSPYLNSLG SNFTHGANFA SGGSTINIPK 120
  121 SILPNGKLSP FSLQIQYIQF KEFISKTKLI RDQGGVFATL IPKEDYFSKA LYIFDIGQND 180
  181 LTIGFFGNKT IQQVNATVPD IVNNYIENIK NIYNLGARSF WIHGTGPKGC APVILANFPS 240
  241 AIKDSYGCAK QYNEVSQYFN FKLKEALAEL RSNLSSAAIT YVDIYTPKYS LFTNPEKYGF 300
  301 ELPFVACCGY GGEYNIGVGC GASININGTK IVAGSCKNPS TRIIWDGVHY TEAANEIVFS 360
  361 QILTGVFNDP PISLDRACYR K

Type	Start	End	Confidence
Signal Peptide	1	28	0.98
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	381	0.99