YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39593796, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLLLVSAF LAVSSAARNG IDLNVPVTVS TFQCVKNAGY SFVIPRIYHS LGTVDTTGVQ  60
   61 NVKNARAAGL TDVDGYIFPC PKTSCPSAAN QVKAALDAVK AAGTHVSTLW LDIERLNWPA 120
  121 NHATNRAFIE AMVAEAKAYG QTVGIYTNYY NWQDIVGLDY HAQSNLMLWW AAYDGVKDFS 180
  181 KYAPFGGWSK PTIHQWEEIT SKGPCGISGV DMNYVP

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	216	0.99