YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157755883
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSMVFAVFL VFLKYSNARV IVEPVSLATY DDGVARNSFF PLAAAAYSSN PQKCLTAKFT  60
   61 NAQLRRQLNV VCDAVKKDIC SAYTAVLNDN KAIVISFRGT QGFLQLIEEA DKSVFQSQSP 120
  121 WVAGGKVSKY FGDAFNTLWN AGMKDDVSSL LHKNPTFEVW VTGHSLGGAM ASLAASYIVK 180
  181 NGIATGDKVK LVTYGQPRTG TTPFAVAHDA QMAYSYRVTH NRDIVPHIPN EGMEDYKHHK 240
  241 SEVFYKESMN PGASYKVCSS ADESNDCSNG LLITASVSDH LTYFTKDVSQ WGEAGCN

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	297	0.98