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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39593685, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RHRRPPREIE TPSATIRYEP VVEKGSWLQS CCSWDLLVFL LLVSGACGFI VLHLYLYPTL  60
   61 DKMSQLPNID PDNAPFTWGT YRPHMYFGLR TRSPFSPLFG MMWYEQPDTI QRPHIRHWCH 120
  121 QDDHLPGYYW YEADGRTFGR QNISDAHRVK LNMAKGRRYN VILYFSAQEL ATRFRLGKHL 180
  181 KDIFYGTNEL LGAFTFSVHL KNGTKLNSSH STMLTDERIP IEKYQDYIME NTQAYNAPNQ 240
  241 PLHYLLNEKK NSEEGKFIAV QLNLGNDAEF DIVLQTEKLK AMKSEEFSNT LRSRTYNFNK 300
  301 KYENAFQLGG KNYTKNQLKM AKVAISNMLG SMGYWYGHNR VVFNNLIHPY GPHAFFSAVP 360
  361 SRPFFPRGFL WDEGFHQMLI RKMDPKMTLE VIVSWMNVMD TSGWIPREMI VGSEAEAKVP 420
  421 AEFIPQRPDV ANPPTLFYVM DKLIHDERTI SRYSGILKLL YPRLEKWFTW LRITQAGPSR 480
  481 TTFRWRGRNS TILSELNPKT LSSGLDDFPR ASHPTDNEYH LDLKCWLALA SRVLARLARS 540
  541 YGTEQEYQKA SKAMEELNNF ETLQKDHWSE EAQGFFDYGK HSKDVALAPV PASGSPRQFE 600
  601 YQRVASLAPT YQLVTDAFGY NNLFPLMLKM IPARSPALKA TLDKIRDPEV LWTNYGLRSI 660
  661 SKKSPYYLAK NTEHDPPYWR GYIWININYM VLSSLHHYSE QNGPHKDLAK KIFHELRTNL 720
  721 VTNMANQFQK TGFLWENYDD RTGQGRGCHP FTGWSSLILL IMSDNLDT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle