YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187034600, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKTLGSMGP EVDATGEPIV CLYKSNGMRK KVFEMSPKQK PREKSWWSPS EMLLRSRFLR  60
   61 RQLAVPRRLL LYRITSERRS WSSVVIYDLH IPLEHKNEAT RRIIIRDVPR LRQHCGTVDE 120
  121 LPFLNSHVNC DERQDNWQEV LRRFLNTFAF LRSSIDVRPD PKDSVQFVKQ DSQYPIEHRP 180
  181 QPEVVYRQHN SSLIVLLVII PLSVGGFAVC LIFLNYHCKM C

Type	Start	End	Confidence
Non-Cytoplasmic	1	192	0.75
Transmembrane Helix	193	216	0.90
Cytoplasmic	217	221	0.66