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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157756309
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLVHEPDSMD SRSSPYIRPA PYSGGVHPHF EEEDDRSRLH ASALYSERRT SSRKSLRSQK  60
   61 IDYHATTIKT LWFDFCARTS SHGIPYVATS SFFGRYVWAA LFMCMLMAFL LQTYWTMSEY 120
  121 LQYRTIIEMQ LQFEAAAFPA ATVCNLNAFK YSELIQYDEI KEGFDYWERV INARMMSDSM 180
  181 KPGGEILEAI SVRKKRAKDR SDLLFPIDDE DLEGAEYQPV FVRCTCMNME QCVPNRNPLE 240
  241 VNASICMCFE DVTRGLIWPC YPTSVWTVKK CSGCSISNTC PDPDGPNAAK NIAKNHNPLP 300
  301 CLCQSISHHC MVHPKDEIRW WNPNNYTVYS VTDPPTTEIT ETEEAFGLSD LKDAGAITTQ 360
  361 TKENLIFLVA ALPRETRRNL SYTLNEFVLR CSFNSKDCSM ERDFKLHIDP EYGNCYTFNF 420
  421 NDSVELKNSR AGPMYGLRLL LNVHQSDYMP TTEAAGVRLV VHEQDQEPFP DTFGYSAPTG 480
  481 FISSFGLKTK ELHRLSAPWG NCSDTFRPVP YIYNEHYSPE GCHRNCFQLK VLEICGCGDP 540
  541 RFPLPSEEHR HCNAKSRTDR QCLSNLTSDS GGYHHLHEQC ECRQPCHEKV FETAYSASAW 600
  601 PSINFKIGTD CPAVSDIFND TEACTEYYRQ NTAYIEIYYE QLNFESLKET AGYTLVNLFS 660
  661 DFGGNIGLWI GFSVITFAEF AELFCEICKL MYIKGVIYVQ KKIQKKEYKS SSLMQIDFLQ 720
  721 RSPKKGQREP GEDEMSTNES TKELMSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle