YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39593424, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFFLALSVA VSAVSATYGS GSTYNRPSYS SNPVYYPPAV YDSHYWDYSS RERHHKECPK  60
   61 ITTFAGQLPG IPAEAFYPPV IRYVKYGRNV HALISCDKDP KNVNFLFARH NSSRDVRQTN 120
  121 LIAMGSTAGV VVKCDRDERR YEGIAIDLYD EDDYSKTVDV TQVTCMGLDN SAIGLLLELA 180
  181 VREFSTEIFA FMNFVDFFNT GVPAAPVIPP VRRKRDVSDV STSAPAEETA NDITAEATDA 240
  241 PTTGAAANNE VTETPSAPAA VTDKDTENST AASDDVSEAA KSDVTDAPDT TEAPAPGSPE 300
  301 AVKQAAAKLG AILGRIFHK

Type	Start	End	Confidence
Signal Peptide	1	19	0.93
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	319	0.99