YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39593309, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLVALTLL ATLASARPQD VDSNRIVALP QDDLDVSAIV FEKIEVKPAP AVVSVDASYA  60
   61 YGVDLAVPAT LAQMNCLKTS RYAAVFLRAF APTGSGVFDT TSVNNIRNAY SAGLGIEVYM 120
  121 TPQPLSSLQG YQQLDLLYNG LTNNGITIRS VWIQVTSPAN WQKSATTNVN FINSIVSRAK 180
  181 QYGLTVGIYT NQYDWSQITG NWATLSSDVL LWYWHVLGGG VTGETPATFD DFRAFGSFKK 240
  241 ASVKQFAQVE SVCSLTVNRD VYAVGIPAAA SSSKKAITEN SKIFVGGVVG F

Type	Start	End	Confidence
Signal Peptide	1	18	0.95
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	291	0.99