YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45356824
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLTEIIFVL TGTCAILVFG GKIASLIMML ITKLFCPLPE AFFTSLGKWA VITGGSDGIG  60
   61 RAYAEELSKQ GMSVIIISRN QEKLDRAAKK IELNTGGKVK VIAADFTKDD IYGHITENIE 120
  121 GLDIGVLVNN VGILPSQIPC KLLETSDLEE RIYDIVNCNV KSMVKMCRIV LPGMQQRRRG 180
  181 VILNVSSGIA KIPCPIYTLY AASKVFVERF SQGLQAEYIS KGIIIQTVAP FGVSTAMTGH 240
  241 QKPDMVTFTA EEFVRSSLKY LKTGDQTYGS ITHTLLGRIV QSIPTWVLQS ETFQHHFQEY 300
  301 VKNRDRR

Type	Start	End	Confidence
Cytoplasmic	1	6	0.56
Transmembrane Helix	7	31	0.72
Non-Cytoplasmic	32	307	0.73