YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39593022, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYLAVTILV LIIGAESGKE HIAGACHDPL DFGKSPCDKQ WSIRYHMDVS TETCLAFNFT  60
   61 GCGDNWNNFA TSQACYEGCL PLDHHKCPAA STIYKTIKGR TACNDDCDCG KGKYCDIGHG 120
  121 YGQCCEQEYK DKVDSDYNPP CPPGQSIVRE KLNGITVQLI GKKCTHNFCP LGSNCYDGHF 180
  181 FASCCM

Type	Start	End	Confidence
Signal Peptide	1	17	0.95
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	186	0.99