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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39592976, gi|...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTNLTDEPHG RTSRTNLRDG PHGRTSLTDE PDEPHERTLR TNLTGGPHGR TSWKNLTDGP  60
   61 HGRNSRTNLT KLMNEPHGRI SWSNLTKNLK KTRRENLTTK TDEKGNEKLT KNGRKPQVRQ 120
  121 VRLSVMFSHT VLPLTITKAI TQAFPFSSSL QRFYVSSHNE QSIRYLFVSH SHILLYHSAR 180
  181 CTVRYIRKGS ACHNHCHLTM SAKTLVYGAS FLSGLAILGY VFTVGYIFND INEFYDQTME 240
  241 TMDEFKLNER GAWHGMVERT RAPSEILFGR AKRQAGQCNC GAQSSGCPAG PPGPPGAPGA 300
  301 PGDDGHPGDA GKPGASGVSV GVSSEAGGCI KCPAGEPGPA GAPGPDGPAG PDGQPGQDGP 360
  361 AGQPGPAGTA GPVGDAGAPG APGQDGQPGA PGKDGQRSTG TPGAAGAPGP AGPAGQDGQP 420
  421 GAAGGPGEAG APGAPGPDGQ PGQPGQDGEA GAPGQDGQPG ADAAYCPCPA RSVAVQRSAS 480
  481 RRRASKVVVA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle