YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ZFPL1_CAEBR
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCKCPKRK VTNLFCYEHR VNVCEFCLVD NHPNCVVQSY LNWLTDQDYD PNCSLCHTTL  60
   61 TQGETIRLNC LHLLHWRCFD DWAASFPPTT APAGYRCPCC SQEVFPPINE VSPLIEKLRE 120
  121 QLKQSNWARN ALGLPVLPEL NRPVKNIAPI PPPPPPQVKH VSYDDSPAQK EIPIHHNRSE 180
  181 TPATHLEMED TASYSVSNSD VTFARKKNFA SESSSDTRPL LRQDRDADNE ENKYKRRPTI 240
  241 DWMRGLWRAK HGTGVPEDRT SGRKMAIFVM FLALLALITI ITVLKRAGYN GEHSSDPMFD 300
  301 PMANPNIRVA VDDSRLPHL

Type	Start	End	Confidence
Cytoplasmic	1	264	0.61
Transmembrane Helix	265	289	0.82
Non-Cytoplasmic	290	319	0.63