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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187032900, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEYALVFFL VPAFAVIKGP YDIPPELPPL NDENFFDRSH SEYETVLTRE DFELGVRITA  60
   61 AMAHDNGDIW DSDAMYSKDR FEGDIANDNL NASTVELFVN GGSGKTEDGK WYNAIKNRLQ 120
  121 LWPEGRIPYT ISSQYSSYSR SLIAASMQEY ASHTCIRWVP KEAVDVNYVH IYPDRGCYSM 180
  181 VGKMGGKQSL SLGSGCIQKG IILHELMHAV GFFHEQSRTD RDDHITIMWN NIQSGMQGQF 240
  241 EKYGHGTIQS LGTSYDYGSI MHYGTKAFSR NGQPTMIPKK NGAQIGQRNG FSKVDKFKIN 300
  301 TLYGCPVDGE KPTTAAPTSA PIVVTVKPVV ISSVKPPIVQ TISPAVPLKP NECRNLRGDC 360
  361 DHLAKQGWCI RNPGWMRANC PIPCGMCIPI KTTPPQPITV QPTTTPKPQK PITQPIIQPL 420
  421 PPVPVLPPTT PEDCEDLRVD CLVLVSQRYC KISQNFMKSY CAKSCGFCYK PPPTEIPDNG 480
  481 PLPTVVTTRP LVTLPPAVIR SRSPAPTVST SSTTNAPTTS TTTATTFTAT PPTGECADRK 540
  541 HFCSHWKSAG FCEGIFMNYM KKNCPASCGM C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle