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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39592454, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKTKWRLNL KLVLLIFIAQ IQISEAVKCF DCVGMDCMGS FCEGDYCMIS QYAPRWGSAR  60
   61 WGEPEIVKGC AKGSMLAKDV RDHCEFAEDS DEPFTCFCNG KDLCNSRKTI RKVEREDVEL 120
  121 VQCVCNGAHC RNDKTCIGEL CTFVKNHKTK QVEQGCTNAS VPLIERRAIG SCMAPPITGA 180
  181 MHHVAKEAES LLAVESCICG TDYCNSEKPS ISVPEKEKCN ALVEVTTMGT TTRSENISCT 240
  241 GEFCFTASIK SKLGVMSSYR IYGCASFTGE DALPEELDPT GCAIFTSESL ETKTCFKTSD 300
  301 RAAVGRALAS KQIPESKASK PSKGKSSKSK PKQVEVEYDD EEEEEEEEKA EKPKGKSPKN 360
  361 REKAAEEAKK EEKIKEEEEE EEEREEEEKE KEEKEETSTK KSFIFQKPTQ PPIPDDSNTT 420
  421 MITVFVLIII CILGSGIVWK FELHKKLRRS NYDSVAGG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle