YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TOM20_CAEBR
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDTLFGFNK SNVVLAAGVA GAAFLGYCIY FDHKRINAPD YKDKIRQKRR AQAGSGGMAA  60
   61 RRPPAGGNEM APDVTDPSQM QRFFLQEVQL GEELMAAGNV EEGAVHIANA VMLCGESQQL 120
  121 LSIFQQTLSE EQFRAVVQQL PSTRERLADM FGARADEAEN EPPLVQYLGD GPPPAQIQEL 180
  181 IDDTDDLE

Type	Start	End	Confidence
Non-Cytoplasmic	1	12	0.61
Transmembrane Helix	13	31	0.67
Cytoplasmic	32	188	0.54